I often play tower spamming Rook. Its a very satisfying strategy as long as you realise what you roll is. Perhaps I can give you some advice.
The worst thing that can happen to a tower spamming rook is to have his towers destroyed. With a 12 second cooldown and a hefty enough mana cost, taking out the towers can be a real pain to him.
Early on he will run out of mana very quickly. Shouldnt be a problem for you to take them down and keep them down.
Later on in the game you really need to have a bunch of towers to do good damage. If you focus on taking them down, Rook will have a very difficult time outpacing you.
If you have 2 rooks pushing the same lane on a larger mao you can always push a different lane. You then go from head on colissions with Rooks to a race with Rooks. Even ebtter would be to dive into their base and take the portal that feeds the lane they are in. Not only will this SERIOUSLY slow down their advance, more importantly, it will force them to come back and take the portal again. An Erebus equiped with a teleportation amulet can be a REAL pain like this. Bat past towers, take flag, Teleport out, rinse and repeat. The Rooks will be going mad as you are now foring them to travel a lot and everyone knows, Rook hates travelling.
Now I cant really see anyone playing 2 rooks as a strat other then on crucible. MAYBE on prison. In either on of these it is fairly eaqsy to dive to the portal and take it over. You dont even need erebus to do it (although damn he makes it easy, espceially on crucible where his mist and bat can be used to awesome effectiveness batting over the gap to the portal and misting in front of it to completely block the wave and gain great XP and money, and then unmisting and taking the portal when he needs to.
In other words, you have 2 options. You can attempt to fight them on their own ground by trying to outpace the speed at which they place towers, or you can make them play a different game where tower spamming doesnt help them that much and their slow speed hurts them.
That would be my suggestion. For backdooring there are ways with every character. The simplest would be to grab a health potion, wait for the rooks to be far from base and then run past the towers, stand in front of the portal flag so the portal towers dont shoot you and take the flag while drinking your potion if you need it. By doing this repeatedly you will force the Rook team to be contsantly moving from the front lines, which then gives you time to engage just 1 Rook or the towers they put down.
Hope it helps,
Chaos